CDS

Accession Number TCMCG057C22765
gbkey CDS
Protein Id XP_018485664.1
Location join(<2479438..2479515,2479591..2479809,2480007..2480366,2480435..2480617,2480710..2480852,2480924..2481008,2481090..2481299,2481397..2481549,2481627..2481731,2481811..2482005)
Gene LOC108856379
GeneID 108856379
Organism Raphanus sativus

Protein

Length 819aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018630162.1
Definition PREDICTED: probable acyl-CoA dehydrogenase IBR3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description acyl-CoA dehydrogenase family member
KEGG_TC -
KEGG_Module M00013        [VIEW IN KEGG]
M00036        [VIEW IN KEGG]
M00087        [VIEW IN KEGG]
KEGG_Reaction R00924        [VIEW IN KEGG]
R01175        [VIEW IN KEGG]
R01279        [VIEW IN KEGG]
R02661        [VIEW IN KEGG]
R03172        [VIEW IN KEGG]
R03777        [VIEW IN KEGG]
R03857        [VIEW IN KEGG]
R03990        [VIEW IN KEGG]
R04095        [VIEW IN KEGG]
R04432        [VIEW IN KEGG]
R04751        [VIEW IN KEGG]
R04754        [VIEW IN KEGG]
KEGG_rclass RC00052        [VIEW IN KEGG]
RC00068        [VIEW IN KEGG]
RC00076        [VIEW IN KEGG]
RC00095        [VIEW IN KEGG]
RC00148        [VIEW IN KEGG]
RC00246        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00249        [VIEW IN KEGG]
EC 1.3.8.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00071        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00410        [VIEW IN KEGG]
ko00640        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
ko03320        [VIEW IN KEGG]
map00071        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00410        [VIEW IN KEGG]
map00640        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
map03320        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003995        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006635        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009062        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0019395        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0033539        [VIEW IN EMBL-EBI]
GO:0034440        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050660        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072329        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
GATCGAGTTATTGGAATACTTGACTGGGAACTGTCCACGCTTGGGAACCAAATGTGTGATGTTGCATACAGCTGTATGCATTACATTGTGAATGTTCAGCTTGATAACGAGCATGTGGGTGATGGTCTTGAAACCACCGGACTTCCAGAAGGATTACTTTCGATGCCAGAGTTTCTCTTAGAATACTGTTCTGCAGTGGGGAAACCATGGCCTTCTGCAAACTGGAAGTTCTACGTAGCCTTCTCTTTGTTTCGAGCTGCTTCGATCTACACGGGCGTGTACAGCAGATGGTTAATGGGGAATGCTTCTGCAGGTGAACGTGCCCGGAACACAGGGGCTCAAGCCAATGAGCTTGTGGAGTGTGCCTTGGGTTATATCGCACGGGAGGATGTTCTTCCTCCGCACCCTCCATCTGGTAAAAGAGATGTGAGCCCATCGTATGAAAGCCTTGTGGATGCAAGCGGGAGATTTGTGCCCAACGGAAAAGTGTTGGAGTTAAGGCAGAGGTTGATCAAGTTTATGGAAACTCACATCTACCCGATGGAGAAAGAGTTCTCCAAACTTGCTCAGTCAGATAAGCGTTGGACCGTTCACCCTGAGGAGGAAAGGTTAAAGGAGGAGGCAAAGAGACAAGGCCTATGGAACTTATTCATTCCTGTGGATAGTGCTGCTAGAGCTAGAAGAGAACTAGCAGCTATTGAGAATAAACAATCTTTTGATCAATTGTTTGGAGAGGGTCTCACGAACCTGGAGTATGGTTACCTTTGTGAGATCATGGGTCGTTCAGTTTGGGCTCCTCAGGTTTTCAACTGTGGTGCACCTGATACTGGAAACATGGAGGTGATACTTCGGTATGGAAACAGAGAACAGATTTCTGAATGGCTTATTCCGCTGCTTGAAGGAAAGATTCGTTCCGGATTTGCTATGACTGAGCCACAAGTTGCATCTTCTGATGCAACCAATATTGAGTGCTCCATTACAAGACAAGGTGATTCATATGTGATCAATGGAACAAAATGGTGGACAAGTGGAGCAATGGATCCCAGGTGCAGAGTGCTTATACTCATGGGAAAAACTGATTTCAACGCTCCAAAACATAAGCAACAGTCTATGATACTAGTGGACATGCGGACTCCAGGTATACACGTGAAGAGACCTCTCACGGTGTTTGGTTTCGACGACGCGCCTCATGGACACGCTGAGATTTCTTTTGAGAATGTGGTTGTCCCGGCGAAGAATATTCTCCTAGGAGAAGGCCGAGGCTTCGAGATTGCTCAGGGAAGGTTAGGCCCTGGAAGATTGCACCATTGCATGAGATTAATAGGTGCAGCAGAGCGTGGGATGGAGCTAATGGCTCAAAGAGCTCTTAGTAGGAAGACTTTTGGTATGTTCATAGCGCAGCACGGTTCTTTTGTCTCTGATCTTGCAAAGTTGCGAGTAGAGCTGGAAGGAACCAGATTGTTAGTTCTAGAAGCTGCTGATCATCTCGATAAGTTTGGAAACAAAAAAGCTCGAGGGATTCTCGCGATGGCCAAGGTTGCAGCTCCAAACATGGCGTTGAAGGTACTAGACACGGCTATTCAAGTTCATGGAGCAGCTGGTGTGTGCTCGGATACAGTTTTGGCGCATCTCTGGGCCACGGCTAGAACGCTCAGGATTGCTGATGGACCTGACGAGGTTCATCTTGGGACCATTGGCAAGTTAGAGTTACAGAGAGCTTCAAAGCTTTAA
Protein:  
MGSSTGDLVTRVQSAHLFDHDALFRYAADNVSGFPTNPSQFTISQFGHGQSNPTFLIAVGSGSSTKRYVLRKKPPGKLLQSAHAVDREFQVLKALGEHTQVPVPKVFCLCTDPSVIGTAFYIMEFMEGRIFIDPKLPNVAPGRRSAIYRATAKALASLHSADVDAIGLDKYGRRANYCRRQIDRWFKQYLASTSEGKPERNPKMFELVDWLRKTIPAEDSTGATSGLVHGDFRIDNLVFHPSEDRVIGILDWELSTLGNQMCDVAYSCMHYIVNVQLDNEHVGDGLETTGLPEGLLSMPEFLLEYCSAVGKPWPSANWKFYVAFSLFRAASIYTGVYSRWLMGNASAGERARNTGAQANELVECALGYIAREDVLPPHPPSGKRDVSPSYESLVDASGRFVPNGKVLELRQRLIKFMETHIYPMEKEFSKLAQSDKRWTVHPEEERLKEEAKRQGLWNLFIPVDSAARARRELAAIENKQSFDQLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRYGNREQISEWLIPLLEGKIRSGFAMTEPQVASSDATNIECSITRQGDSYVINGTKWWTSGAMDPRCRVLILMGKTDFNAPKHKQQSMILVDMRTPGIHVKRPLTVFGFDDAPHGHAEISFENVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTFGMFIAQHGSFVSDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVCSDTVLAHLWATARTLRIADGPDEVHLGTIGKLELQRASKL